Dataset Classes

These classes define the main loading interfaces for the current on-disk dataset format: a base class, one dataset per modality (H&E, multiplex imaging such as IMC, CODEX, and CycIF, and IHC), a composed multimodal dataset, and a multi-cohort dataset.

BaseImagingDataset(name, modality, resolution)	Base class for all imaging datasets.
HEImagingDataset(name, resolution[, path, ...])	Class for handling H&E stained imaging datasets.
MultiplexImagingDataset(name, modality, ...)	Class for handling multiplex imaging datasets.
SingleIHCImagingDataset(name, marker_name, ...)	Class for handling IHC stained imaging datasets.
ComposedImagingDataset(name, modalities, ...)	Compose multiple unimodal datasets (HE, Multiplex, etc.) into a single handle.
SporaDataset(dataset_names, *[, ...])	Dataset-of-datasets wrapper for sampling tissues or tiles across cohorts.