spora-io

Getting Started

  • Installation
  • Quick Start
  • Adding a Dataset
  • Tools and Scripts
  • Concepts

API Reference

  • API Reference
    • Data Types
    • Dataset Classes
    • Utilities

Additional

  • Examples
  • Changelog
spora-io
  • API Reference
  • View page source

API Reference

The pages below document the current public classes and helper modules used by spora_io.

  • Data Types
    • Tissue Types
    • Masks
  • Dataset Classes
    • Base
    • H&E
    • Multiplex (IMC, CODEX, CycIF, etc.)
    • IHC
    • Composed (Multi-modal)
    • SporaDataset (Multi-cohort)
  • Utilities
    • Standardization
    • Image Transforms
    • Tiling
    • General
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